Following are some of the top ranking universities in the Czech Republic:

Czech Technical University in Prague
- It is one of the largest universities in the Czech Republic and the oldest institute of technology in Central Europe.
- Placed among the world's top 400 institutions (394th) in the QS World University Rankings™ 2009. It is also ranked highly for Engineering & IT (171st globally).

Masaryk University
- It is the second-largest public university in the Czech Republic and the leading higher education institution in Moravia.
-The University was one of the first to introduce a three-tier structure of studies based on the ECTS system for the transfer and accumulation of credits.
- It was the first Czech university to introduce an electronic application form for studies.
- Placed among the world's top 600 universities in QS World University Rankings™ 2009.
- Rated 2nd in Czech Republic and 222nd internationally in the world university ranking 2010.

Charles University
- It is one of the oldest universities in Europe in continuous operation.
- Ranked 1st in the country and 110th in the world according to the Webometrics Rankings in January 2010.
- Ranked 201-302nd globally in the Academic Ranking of World Universities 2009.

Brno University of Technology
- In the international rankings published by The Times, the Brno University of Technology is regularly placed among the 400 to 600 best universities world-wide. In 2009 The Times Higher Education Supplement included BUT among the 500 best universities in the world (in the area of engineering and IT, BUT came 245th).
- For the period 2009 – 2013 the University has been awarded the European Commission’s prestigious ECTS and DS Label certificates, issued in recognition of quality higher education.

University of West Bohemia
- It is a leading institution of higher education which prepares students for careers in engineering (electrical and mechanical), science (computer science, applied mathematics, physics, mechanics), education (for both primary and secondary school teachers in a wide range of subjects), fine arts, and more.
- Ranked 5th in in Czech Republic and 533rd in the world (Webometrics Ranking, Jan. 2010).

* Suggested Reading:

Top 100 Universities in Europe

Medical Schools in Czech Republic
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World University Ranking Tables

America - US News & World Report, The Princeton Review, BusinessWeek
Canada - Maclean's, Gourman Report Ranking of Canadian Universities
UK - Sunday Times, Guardian, Times Good University Guide, Daily Telegraph
World - Shanghai Jiao Tong ARWU Rankings, Webometrics, Newsweek